Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914661.1_cds_XP_016464632.1_57656
CDS Infomation

[gene=LOC107787555] [db_xref=GeneID:107787555] [protein=sodium transporter HKT1-like isoform X2] [protein_id=XP_016464632.1] [location=join(4455..5680,11387..11614,11852..11864)] [gbkey=CDS]
Sequence

ATGAAGAGTTTATCTTATTTTGGAAACAAGCTACAACATCTTTGTAACTCCGTATATTCA
AACCTTGTTTGCTTTGTTAGATCAACATGCTTCCTCATTTCTTGCTTTTACAAATTCATT
CTTCTTAGAGTTCACAAATTTTTCGTACAACTTTTTTACTTCATCTTCATCTCCCTTATT
GGTTTTTGGATTCTCAGAATCTTGAAATCAAGGAGTACTAGTGGTGATTTTGCACCTAGG
AATTTAGACTTGTACTTCACTTCTGTTTCTGCTGTGACAGTCTCGAGCATGTCCACTGTA
GAAATGGAAGTCTTTTCCAATTCACAACTTATTCTTATAACATTTTTGATGCTAATAGGT
GGTGAGGTCTTCACTTCTATGGTTGGTCTTCATTTAATTAGGCCTAAGTTTAAGCCATGG
AGAAAAGATAGCAAAATTGAGTCAGTAATTAGTAGTGCTACCACTTCTCCAAGAAACACA
AATTTTAATGACGATATTGAGTTGAACATTGTGGTAATACCTGATTCCCCAAAATCCAAC
TTAGAAAAAGATGAATTTGATCAAGATGATTTTGGTTCATCGTCAGATACTCAAACTCTC
AAGTACATTTCTATTAAATTCCTAGGGGTTGTAGTTTTAGTATATTTTTTAGTCATGCAC
ATTCTTGGTATCTCATCAGTTCTAGTGTACCTAGCCTGTGTCTCAAGTACAAAAGATGTA
CTAAGAAACAAGGGGCTAAAAACCTCCACCTTCGCTATTTTCACAGTTGTTTCTACCTTT
GCAAGCTGTGGTTTCGTTCCGACAAACGAAAATATGGCTGCATTTAGCAAGAATTCAGGA
CTTCTTTTGATTCTAATTCCCTCAATACTGTTTGGAAACACATTGTATCCAGCATGTTTG
AGAGTTTCTGTTTGGTTCGTCGGAAAATTCTTCAAAAAAAGGGAAGCTAAGTTTTTGTTG
AAGAATTCAAGAGAGATAGGACATCTCCACTTGTTTCCTGGCCTAAGTTCAAGATTTTTA
GTGGTTACGGTGTTTGGGTTCATATCATTGCAGTTATTTTTGTTTTGCACTTATGAATGG
AATTCCGATACCCTGAATGGGCTAAATAGTTACCAGAAAATTGTGGGTTCATTTTACCAA
GTTGTGAACACAAGACACGCTGGTGAGTCCGTCGTAGATATCTCTGCCATTGATCCAGCC
GTTTTGGTAGTGCTCATGGCAATGATGTATCTTCCCCCATATACTACATTTTTACCCGTA
AAAGGAGTTGAAGAGTATCGAGAAGATCTTCCAGGGAAAAAGAAAGAAAGAGGAAAGCTT
GCAGAAAATGTCATATTTTCTCAGCTTTCTTATATTGTCATATTTATTATTCTTATCTGC
ATCACGGAAAGGAAAAGTTTGAAAGCTGATCCACTCAACTTCAATGTATTTAATATTGCA
TTTGAAGTCATAAGGGAGATGGAGTGA

Peptide Sequence

PEP ID

XP_016464632.1
PEP Infomation

PREDICTED: sodium transporter HKT1-like isoform X2 [Nicotiana tabacum]
Sequence

MKSLSYFGNKLQHLCNSVYSNLVCFVRSTCFLISCFYKFILLRVHKFFVQLFYFIFISLI
GFWILRILKSRSTSGDFAPRNLDLYFTSVSAVTVSSMSTVEMEVFSNSQLILITFLMLIG
GEVFTSMVGLHLIRPKFKPWRKDSKIESVISSATTSPRNTNFNDDIELNIVVIPDSPKSN
LEKDEFDQDDFGSSSDTQTLKYISIKFLGVVVLVYFLVMHILGISSVLVYLACVSSTKDV
LRNKGLKTSTFAIFTVVSTFASCGFVPTNENMAAFSKNSGLLLILIPSILFGNTLYPACL
RVSVWFVGKFFKKREAKFLLKNSREIGHLHLFPGLSSRFLVVTVFGFISLQLFLFCTYEW
NSDTLNGLNSYQKIVGSFYQVVNTRHAGESVVDISAIDPAVLVVLMAMMYLPPYTTFLPV
KGVEEYREDLPGKKKERGKLAENVIFSQLSYIVIFIILICITERKSLKADPLNFNVFNIA
FEVIREME

Transcript Sequence

Gene sequence data has not been registered.